Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HIST3H2BA-201ENST00000436555 524 ntBASIC13.51□□□□□ -0.25
VPS13CQ709C8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 RPS2P36-201ENST00000456516 831 ntBASIC13.51□□□□□ -0.25
VPS13CQ709C8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 MIR4722-201ENST00000578292 60 ntBASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 FAM86HP-204ENST00000513466 959 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AL158212.4-201ENST00000624062 1286 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AP001094.4-201ENST00000579008 2176 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 CLK3P2-201ENST00000427566 1453 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 GPAA1P2-201ENST00000417923 928 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 AC006033.1-201ENST00000440505 426 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 RPL13AP20-201ENST00000459725 609 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 GNRHR2-203ENST00000581100 1187 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 AC091271.1-201ENST00000611877 1162 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13CQ709C8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13CQ709C8 AC080080.1-201ENST00000625121 2420 ntBASIC13.5□□□□□ -0.25
VPS13CQ709C8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.49□□□□□ -0.25
VPS13CQ709C8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 TIMM17BP1-201ENST00000545713 516 ntBASIC13.49□□□□□ -0.25
VPS13CQ709C8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 ACTG1P17-201ENST00000558391 1119 ntBASIC13.49□□□□□ -0.25
VPS13CQ709C8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 KRT8P13-201ENST00000463294 1010 ntBASIC13.49□□□□□ -0.25
VPS13CQ709C8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 Z97205.2-201ENST00000564697 1639 ntBASIC13.49□□□□□ -0.25
VPS13CQ709C8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.49□□□□□ -0.25
VPS13CQ709C8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
VPS13CQ709C8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13CQ709C8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13CQ709C8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13CQ709C8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms