Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 AC004840.1-201ENST00000636359 365 ntBASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC149Q6ZUS6 BTBD7P1-201ENST00000447253 1453 ntBASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 AL512652.2-201ENST00000625156 1716 ntBASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 OR6D1P-203ENST00000641209 4860 ntBASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 AC087499.6-201ENST00000411576 835 ntBASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 AL080243.2-201ENST00000418783 582 ntBASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 AL391825.1-201ENST00000457671 1364 ntBASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC149Q6ZUS6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 AL589702.1-201ENST00000641229 1509 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 INE1-201ENST00000456273 945 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 SERBP1P3-201ENST00000459980 809 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 RN7SL752P-201ENST00000463779 287 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ZNF890P-202ENST00000530367 1156 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 AC104794.3-201ENST00000566840 1248 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 AC017083.2-201ENST00000608069 979 ntBASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC149Q6ZUS6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms