Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM35AQ53FP2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM35AQ53FP2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM35AQ53FP2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 REXO1L8P-201ENST00000604378 1897 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AL355306.1-201ENST00000415580 579 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AL671277.1-201ENST00000429656 993 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AP000347.1-202ENST00000435868 847 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 MKNK2P1-201ENST00000437526 628 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 PRYP6-201ENST00000514804 343 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AC092902.6-201ENST00000641783 218 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AL592424.1-201ENST00000563624 1536 ntBASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM35AQ53FP2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC092364.2-201ENST00000596710 2692 ntBASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC073439.1-201ENST00000624121 1774 ntBASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 YBX2P1-201ENST00000394192 760 ntBASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 DNAJB3-201ENST00000446806 729 ntBASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 RN7SL589P-201ENST00000481268 310 ntBASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM35AQ53FP2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM35AQ53FP2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms