Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC015818.8-201ENST00000587907 1519 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 AC009113.1-201ENST00000570267 2443 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 GGT4P-201ENST00000623672 1708 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL16A1Q07092 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.72■■□□□ 1.07
COL16A1Q07092 MIR1202-201ENST00000408529 83 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 CNN2P10-201ENST00000443067 918 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.72■■□□□ 1.07
COL16A1Q07092 AC134698.3-201ENST00000523880 214 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.72■■□□□ 1.07
COL16A1Q07092 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.72■■□□□ 1.07
COL16A1Q07092 MIR3907-201ENST00000579424 151 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.72■■□□□ 1.07
COL16A1Q07092 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL16A1Q07092 AL139011.1-202ENST00000642063 584 ntBASIC21.72■■□□□ 1.07
COL16A1Q07092 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.72■■□□□ 1.07
COL16A1Q07092 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.71■■□□□ 1.07
COL16A1Q07092 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
COL16A1Q07092 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 KRT18P66-201ENST00000452970 1269 ntBASIC21.71■■□□□ 1.07
COL16A1Q07092 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC21.71■■□□□ 1.07
COL16A1Q07092 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
COL16A1Q07092 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.71■■□□□ 1.07
COL16A1Q07092 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.71■■□□□ 1.07
COL16A1Q07092 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL16A1Q07092 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL16A1Q07092 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.7■■□□□ 1.07
COL16A1Q07092 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
COL16A1Q07092 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
COL16A1Q07092 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL16A1Q07092 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COL16A1Q07092 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.7■■□□□ 1.06
COL16A1Q07092 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 POM121L10P-201ENST00000436994 1285 ntBASIC21.7■■□□□ 1.06
COL16A1Q07092 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 EEF1DP6-201ENST00000449232 372 ntBASIC21.7■■□□□ 1.06
COL16A1Q07092 AC104784.1-201ENST00000473096 294 ntBASIC21.7■■□□□ 1.06
COL16A1Q07092 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
COL16A1Q07092 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 TNXA-203ENST00000507684 2038 ntBASIC21.7■■□□□ 1.06
COL16A1Q07092 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
COL16A1Q07092 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 AL512652.2-201ENST00000625156 1716 ntBASIC21.7■■□□□ 1.06
COL16A1Q07092 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
COL16A1Q07092 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 AL138709.1-201ENST00000614840 1693 ntBASIC21.7■■□□□ 1.06
COL16A1Q07092 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.7■■□□□ 1.06
COL16A1Q07092 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL16A1Q07092 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC21.69■■□□□ 1.06
COL16A1Q07092 AL627389.1-201ENST00000413508 1182 ntBASIC21.69■■□□□ 1.06
COL16A1Q07092 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC21.69■■□□□ 1.06
COL16A1Q07092 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC21.69■■□□□ 1.06
COL16A1Q07092 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.69■■□□□ 1.06
COL16A1Q07092 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.69■■□□□ 1.06
COL16A1Q07092 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.69■■□□□ 1.06
COL16A1Q07092 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL16A1Q07092 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
COL16A1Q07092 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
COL16A1Q07092 AC000095.1-201ENST00000603208 874 ntBASIC21.69■■□□□ 1.06
COL16A1Q07092 AC107373.2-201ENST00000607735 490 ntBASIC21.69■■□□□ 1.06
COL16A1Q07092 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC21.69■■□□□ 1.06
COL16A1Q07092 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC21.69■■□□□ 1.06
COL16A1Q07092 HLA-C-210ENST00000640219 976 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms