Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SLC25A6P2-201ENST00000497974 877 ntBASIC16.24■□□□□ 0.19
PKNOX1P55347 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.24■□□□□ 0.19
PKNOX1P55347 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.24■□□□□ 0.19
PKNOX1P55347 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.24■□□□□ 0.19
PKNOX1P55347 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.24■□□□□ 0.19
PKNOX1P55347 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKNOX1P55347 AC025062.2-201ENST00000605477 670 ntBASIC16.24■□□□□ 0.19
PKNOX1P55347 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PKNOX1P55347 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.24■□□□□ 0.19
PKNOX1P55347 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PKNOX1P55347 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKNOX1P55347 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.24■□□□□ 0.19
PKNOX1P55347 AC006504.4-201ENST00000592118 1568 ntBASIC16.24■□□□□ 0.19
PKNOX1P55347 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.24■□□□□ 0.19
PKNOX1P55347 GGT4P-201ENST00000623672 1708 ntBASIC16.24■□□□□ 0.19
PKNOX1P55347 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKNOX1P55347 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.24■□□□□ 0.19
PKNOX1P55347 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKNOX1P55347 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKNOX1P55347 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.23■□□□□ 0.19
PKNOX1P55347 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 AL353732.1-201ENST00000569618 1459 ntBASIC16.23■□□□□ 0.19
PKNOX1P55347 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.23■□□□□ 0.19
PKNOX1P55347 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.23■□□□□ 0.19
PKNOX1P55347 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PKNOX1P55347 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.23■□□□□ 0.19
PKNOX1P55347 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.23■□□□□ 0.19
PKNOX1P55347 MIR1224-201ENST00000408193 85 ntBASIC16.23■□□□□ 0.19
PKNOX1P55347 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.23■□□□□ 0.19
PKNOX1P55347 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.23■□□□□ 0.19
PKNOX1P55347 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.23■□□□□ 0.19
PKNOX1P55347 PRELID1P1-202ENST00000567272 903 ntBASIC16.23■□□□□ 0.19
PKNOX1P55347 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.23■□□□□ 0.19
PKNOX1P55347 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 GGTLC5P-201ENST00000617623 998 ntBASIC16.23■□□□□ 0.19
PKNOX1P55347 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.23■□□□□ 0.19
PKNOX1P55347 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PKNOX1P55347 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.23■□□□□ 0.19
PKNOX1P55347 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PKNOX1P55347 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.23■□□□□ 0.19
PKNOX1P55347 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKNOX1P55347 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PKNOX1P55347 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.22■□□□□ 0.19
PKNOX1P55347 AC010491.1-201ENST00000563101 2797 ntBASIC16.22■□□□□ 0.19
PKNOX1P55347 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.22■□□□□ 0.19
PKNOX1P55347 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PKNOX1P55347 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.22■□□□□ 0.19
PKNOX1P55347 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.22■□□□□ 0.19
PKNOX1P55347 AC021087.4-201ENST00000563761 564 ntBASIC16.22■□□□□ 0.19
PKNOX1P55347 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 CYP2A7P1-201ENST00000595391 815 ntBASIC16.22■□□□□ 0.19
PKNOX1P55347 AC107918.4-202ENST00000641623 219 ntBASIC16.22■□□□□ 0.19
PKNOX1P55347 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PKNOX1P55347 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PKNOX1P55347 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.22■□□□□ 0.19
PKNOX1P55347 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKNOX1P55347 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PKNOX1P55347 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms