Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
CDH6P55285 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CDH6P55285 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH6P55285 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CDH6P55285 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH6P55285 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.18■□□□□ 0.34
CDH6P55285 PMS2P4-201ENST00000412466 1052 ntBASIC17.18■□□□□ 0.34
CDH6P55285 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.18■□□□□ 0.34
CDH6P55285 MIR3909-201ENST00000579518 119 ntBASIC17.18■□□□□ 0.34
CDH6P55285 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CDH6P55285 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.18■□□□□ 0.34
CDH6P55285 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH6P55285 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH6P55285 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH6P55285 BCAR1-209ENST00000546196 1340 ntBASIC17.18■□□□□ 0.34
CDH6P55285 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDH6P55285 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH6P55285 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CDH6P55285 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH6P55285 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDH6P55285 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH6P55285 AL596087.1-201ENST00000400979 1969 ntBASIC17.17■□□□□ 0.34
CDH6P55285 AC006449.6-201ENST00000612330 2296 ntBASIC17.17■□□□□ 0.34
CDH6P55285 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH6P55285 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH6P55285 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH6P55285 KRT18P2-201ENST00000447938 1258 ntBASIC17.17■□□□□ 0.34
CDH6P55285 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH6P55285 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 SLC25A1P1-201ENST00000528351 927 ntBASIC17.17■□□□□ 0.34
CDH6P55285 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH6P55285 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH6P55285 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH6P55285 AC106730.1-201ENST00000566722 1090 ntBASIC17.17■□□□□ 0.34
CDH6P55285 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CDH6P55285 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH6P55285 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 AC025580.3-201ENST00000617932 1424 ntBASIC17.17■□□□□ 0.34
CDH6P55285 AC004877.2-201ENST00000623941 599 ntBASIC17.17■□□□□ 0.34
CDH6P55285 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH6P55285 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH6P55285 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH6P55285 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH6P55285 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH6P55285 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH6P55285 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH6P55285 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH6P55285 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms