Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLTCL1P53675 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLTCL1P53675 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLTCL1P53675 MIR658-201ENST00000385210 100 ntBASIC23.19■■□□□ 1.3
CLTCL1P53675 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 NME4-207ENST00000450036 985 ntTSL 3 BASIC23.19■■□□□ 1.3
CLTCL1P53675 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.19■■□□□ 1.3
CLTCL1P53675 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC23.19■■□□□ 1.3
CLTCL1P53675 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC23.19■■□□□ 1.3
CLTCL1P53675 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC23.19■■□□□ 1.3
CLTCL1P53675 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 WNT11-204ENST00000621122 789 ntTSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC23.19■■□□□ 1.3
CLTCL1P53675 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CLTCL1P53675 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC23.18■■□□□ 1.3
CLTCL1P53675 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLTCL1P53675 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLTCL1P53675 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.18■■□□□ 1.3
CLTCL1P53675 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC23.18■■□□□ 1.3
CLTCL1P53675 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLTCL1P53675 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC23.18■■□□□ 1.3
CLTCL1P53675 FXR1-221ENST00000491674 365 ntTSL 2 BASIC23.18■■□□□ 1.3
CLTCL1P53675 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLTCL1P53675 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC23.18■■□□□ 1.3
CLTCL1P53675 MIR5189-201ENST00000577370 114 ntBASIC23.18■■□□□ 1.3
CLTCL1P53675 BRI3BPP1-201ENST00000594224 787 ntBASIC23.18■■□□□ 1.3
CLTCL1P53675 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
CLTCL1P53675 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLTCL1P53675 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CLTCL1P53675 REXO1L8P-201ENST00000604378 1897 ntBASIC23.18■■□□□ 1.3
CLTCL1P53675 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.17■■□□□ 1.3
CLTCL1P53675 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CLTCL1P53675 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CLTCL1P53675 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 HIST1H2BPS3-201ENST00000419683 341 ntBASIC23.17■■□□□ 1.3
CLTCL1P53675 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC23.17■■□□□ 1.3
CLTCL1P53675 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CLTCL1P53675 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CLTCL1P53675 RAB43P1-201ENST00000561790 589 ntBASIC23.17■■□□□ 1.3
CLTCL1P53675 AC036164.1-201ENST00000570544 333 ntBASIC23.17■■□□□ 1.3
CLTCL1P53675 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC23.17■■□□□ 1.3
CLTCL1P53675 AL033527.4-201ENST00000641026 673 ntBASIC23.17■■□□□ 1.3
CLTCL1P53675 AMT-232ENST00000636199 1546 ntTSL 5 BASIC23.17■■□□□ 1.3
CLTCL1P53675 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC23.17■■□□□ 1.3
CLTCL1P53675 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC23.17■■□□□ 1.3
CLTCL1P53675 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLTCL1P53675 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CLTCL1P53675 BNIP3P1-202ENST00000550043 1585 ntBASIC23.16■■□□□ 1.3
CLTCL1P53675 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC23.16■■□□□ 1.3
CLTCL1P53675 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC23.16■■□□□ 1.3
CLTCL1P53675 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 AC004987.2-201ENST00000395959 1148 ntBASIC23.16■■□□□ 1.3
CLTCL1P53675 AC124283.3-201ENST00000570869 594 ntBASIC23.16■■□□□ 1.3
CLTCL1P53675 MIR4259-201ENST00000584466 101 ntBASIC23.16■■□□□ 1.3
CLTCL1P53675 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC23.16■■□□□ 1.3
CLTCL1P53675 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC23.16■■□□□ 1.3
CLTCL1P53675 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC23.16■■□□□ 1.3
CLTCL1P53675 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CLTCL1P53675 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms