Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.27■□□□□ 0.52
LBX1P52954 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.27■□□□□ 0.52
LBX1P52954 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LBX1P52954 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 AC097065.1-201ENST00000425737 517 ntBASIC18.27■□□□□ 0.52
LBX1P52954 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.27■□□□□ 0.52
LBX1P52954 HSPB1P2-201ENST00000448722 546 ntBASIC18.27■□□□□ 0.52
LBX1P52954 AC234782.1-201ENST00000451950 919 ntBASIC18.27■□□□□ 0.52
LBX1P52954 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.27■□□□□ 0.52
LBX1P52954 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.27■□□□□ 0.52
LBX1P52954 AC024681.1-201ENST00000521917 487 ntBASIC18.27■□□□□ 0.52
LBX1P52954 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.27■□□□□ 0.52
LBX1P52954 DGAT2L7P-201ENST00000602462 744 ntBASIC18.27■□□□□ 0.52
LBX1P52954 AC007663.3-201ENST00000609632 465 ntBASIC18.27■□□□□ 0.52
LBX1P52954 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.27■□□□□ 0.52
LBX1P52954 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.27■□□□□ 0.52
LBX1P52954 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.27■□□□□ 0.52
LBX1P52954 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LBX1P52954 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LBX1P52954 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LBX1P52954 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LBX1P52954 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LBX1P52954 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.27■□□□□ 0.51
LBX1P52954 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.27■□□□□ 0.51
LBX1P52954 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.27■□□□□ 0.51
LBX1P52954 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LBX1P52954 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 AL136982.4-201ENST00000437689 1740 ntBASIC18.26■□□□□ 0.51
LBX1P52954 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.26■□□□□ 0.51
LBX1P52954 CYP4F24P-201ENST00000586049 1580 ntBASIC18.26■□□□□ 0.51
LBX1P52954 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LBX1P52954 ACKR1-201ENST00000368121 1240 ntBASIC18.26■□□□□ 0.51
LBX1P52954 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 AL008707.1-201ENST00000422498 534 ntBASIC18.26■□□□□ 0.51
LBX1P52954 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 RN7SL181P-201ENST00000462921 277 ntBASIC18.26■□□□□ 0.51
LBX1P52954 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.26■□□□□ 0.51
LBX1P52954 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LBX1P52954 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LBX1P52954 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.26■□□□□ 0.51
LBX1P52954 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.26■□□□□ 0.51
LBX1P52954 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 LINC00304-203ENST00000565008 1864 ntBASIC18.26■□□□□ 0.51
LBX1P52954 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.26■□□□□ 0.51
LBX1P52954 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LBX1P52954 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LBX1P52954 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LBX1P52954 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LBX1P52954 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.25■□□□□ 0.51
LBX1P52954 FGFR3P1-201ENST00000449999 601 ntBASIC18.25■□□□□ 0.51
LBX1P52954 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.25■□□□□ 0.51
LBX1P52954 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.25■□□□□ 0.51
LBX1P52954 AC010234.1-201ENST00000494599 870 ntBASIC18.25■□□□□ 0.51
LBX1P52954 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.25■□□□□ 0.51
LBX1P52954 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.25■□□□□ 0.51
LBX1P52954 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.25■□□□□ 0.51
LBX1P52954 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.25■□□□□ 0.51
LBX1P52954 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.25■□□□□ 0.51
LBX1P52954 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.25■□□□□ 0.51
LBX1P52954 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.25■□□□□ 0.51
LBX1P52954 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.25■□□□□ 0.51
LBX1P52954 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LBX1P52954 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LBX1P52954 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LBX1P52954 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LBX1P52954 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LBX1P52954 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.25■□□□□ 0.51
LBX1P52954 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms