Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLCN2P51788 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.04■□□□□ 0.16
CLCN2P51788 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLCN2P51788 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN2P51788 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN2P51788 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCN2P51788 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLCN2P51788 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN2P51788 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLCN2P51788 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLCN2P51788 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN2P51788 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLCN2P51788 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN2P51788 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN2P51788 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN2P51788 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN2P51788 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 PMS2P1-201ENST00000431037 1228 ntBASIC16.03■□□□□ 0.16
CLCN2P51788 RPS15P9-201ENST00000494093 319 ntBASIC16.03■□□□□ 0.16
CLCN2P51788 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 AL805961.1-202ENST00000641562 540 ntBASIC16.03■□□□□ 0.16
CLCN2P51788 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 DBET-201ENST00000630918 3363 ntBASIC16.03■□□□□ 0.16
CLCN2P51788 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN2P51788 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 FRMD8P1-201ENST00000440433 1524 ntBASIC16.03■□□□□ 0.16
CLCN2P51788 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN2P51788 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN2P51788 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLCN2P51788 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLCN2P51788 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.02■□□□□ 0.16
CLCN2P51788 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN2P51788 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLCN2P51788 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN2P51788 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCN2P51788 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCN2P51788 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CLCN2P51788 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLCN2P51788 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCN2P51788 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN2P51788 KRT18P58-201ENST00000527480 1120 ntBASIC16.02■□□□□ 0.16
CLCN2P51788 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN2P51788 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms