Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.13■□□□□ 0.49
BRCA2P51587 AC018735.1-201ENST00000437208 1502 ntBASIC18.13■□□□□ 0.49
BRCA2P51587 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 AC093724.1-201ENST00000448659 1027 ntBASIC18.13■□□□□ 0.49
BRCA2P51587 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCA2P51587 AC036164.1-201ENST00000570544 333 ntBASIC18.13■□□□□ 0.49
BRCA2P51587 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.13■□□□□ 0.49
BRCA2P51587 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCA2P51587 U62317.3-201ENST00000608319 855 ntBASIC18.13■□□□□ 0.49
BRCA2P51587 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.12■□□□□ 0.49
BRCA2P51587 AC138028.6-201ENST00000616106 1482 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BRCA2P51587 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.12■□□□□ 0.49
BRCA2P51587 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.12■□□□□ 0.49
BRCA2P51587 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.12■□□□□ 0.49
BRCA2P51587 AC134043.2-201ENST00000624206 2238 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BRCA2P51587 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.12■□□□□ 0.49
BRCA2P51587 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.12■□□□□ 0.49
BRCA2P51587 AC005052.1-201ENST00000625181 2492 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BRCA2P51587 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
BRCA2P51587 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.12■□□□□ 0.49
BRCA2P51587 HIST3H2BA-201ENST00000436555 524 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 AC004898.1-201ENST00000451057 766 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 BX284668.4-201ENST00000453917 508 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 AKR7A2P1-201ENST00000460134 915 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.12■□□□□ 0.49
BRCA2P51587 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.12■□□□□ 0.49
BRCA2P51587 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.12■□□□□ 0.49
BRCA2P51587 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.12■□□□□ 0.49
BRCA2P51587 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.12■□□□□ 0.49
BRCA2P51587 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRCA2P51587 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BRCA2P51587 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.12■□□□□ 0.49
BRCA2P51587 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 RN7SL769P-201ENST00000469386 295 ntBASIC18.11■□□□□ 0.49
BRCA2P51587 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.11■□□□□ 0.49
BRCA2P51587 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
BRCA2P51587 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.11■□□□□ 0.49
BRCA2P51587 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.11■□□□□ 0.49
BRCA2P51587 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.11■□□□□ 0.49
BRCA2P51587 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
BRCA2P51587 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.11■□□□□ 0.49
BRCA2P51587 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.11■□□□□ 0.49
BRCA2P51587 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.11■□□□□ 0.49
BRCA2P51587 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
BRCA2P51587 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRCA2P51587 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.11■□□□□ 0.49
BRCA2P51587 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
BRCA2P51587 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
BRCA2P51587 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.1■□□□□ 0.49
BRCA2P51587 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.1■□□□□ 0.49
BRCA2P51587 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.1■□□□□ 0.49
BRCA2P51587 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRCA2P51587 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.1■□□□□ 0.49
BRCA2P51587 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BRCA2P51587 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.1■□□□□ 0.49
BRCA2P51587 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRCA2P51587 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRCA2P51587 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.1■□□□□ 0.49
BRCA2P51587 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRCA2P51587 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
BRCA2P51587 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRCA2P51587 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRCA2P51587 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.1■□□□□ 0.49
BRCA2P51587 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.1■□□□□ 0.49
BRCA2P51587 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms