Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.55□□□□□ -0.08
CX3CR1P49238 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CX3CR1P49238 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.55□□□□□ -0.08
CX3CR1P49238 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.55□□□□□ -0.08
CX3CR1P49238 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 GPAA1P2-202ENST00000606848 1787 ntBASIC14.55□□□□□ -0.08
CX3CR1P49238 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CX3CR1P49238 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 AC004870.1-201ENST00000315132 882 ntBASIC14.54□□□□□ -0.08
CX3CR1P49238 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.54□□□□□ -0.08
CX3CR1P49238 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.54□□□□□ -0.08
CX3CR1P49238 AC079781.3-201ENST00000449110 356 ntBASIC14.54□□□□□ -0.08
CX3CR1P49238 AC108073.2-201ENST00000464002 357 ntBASIC14.54□□□□□ -0.08
CX3CR1P49238 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.54□□□□□ -0.08
CX3CR1P49238 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.54□□□□□ -0.08
CX3CR1P49238 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.54□□□□□ -0.08
CX3CR1P49238 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 AC148477.8-201ENST00000624298 468 ntBASIC14.54□□□□□ -0.08
CX3CR1P49238 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.54□□□□□ -0.08
CX3CR1P49238 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 PCGF3-213ENST00000620529 1899 ntBASIC14.54□□□□□ -0.08
CX3CR1P49238 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CX3CR1P49238 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CX3CR1P49238 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CR1P49238 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CR1P49238 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CX3CR1P49238 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.53□□□□□ -0.08
CX3CR1P49238 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CX3CR1P49238 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CX3CR1P49238 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CX3CR1P49238 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.53□□□□□ -0.08
CX3CR1P49238 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
CX3CR1P49238 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.53□□□□□ -0.08
CX3CR1P49238 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.53□□□□□ -0.08
CX3CR1P49238 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 AC004790.2-201ENST00000623588 572 ntBASIC14.53□□□□□ -0.08
CX3CR1P49238 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CR1P49238 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CR1P49238 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms