Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.36■□□□□ 0.69
NEDD4P46934 POU5F1P6-201ENST00000466990 990 ntBASIC19.36■□□□□ 0.69
NEDD4P46934 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NEDD4P46934 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.36■□□□□ 0.69
NEDD4P46934 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NEDD4P46934 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 AC006449.5-201ENST00000610658 2098 ntBASIC19.36■□□□□ 0.69
NEDD4P46934 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.36■□□□□ 0.69
NEDD4P46934 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEDD4P46934 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.36■□□□□ 0.69
NEDD4P46934 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
NEDD4P46934 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NEDD4P46934 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NEDD4P46934 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
NEDD4P46934 METTL21AP1-201ENST00000438852 635 ntBASIC19.35■□□□□ 0.69
NEDD4P46934 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
NEDD4P46934 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.35■□□□□ 0.69
NEDD4P46934 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.35■□□□□ 0.69
NEDD4P46934 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.35■□□□□ 0.69
NEDD4P46934 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.35■□□□□ 0.69
NEDD4P46934 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NEDD4P46934 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEDD4P46934 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.34■□□□□ 0.69
NEDD4P46934 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
NEDD4P46934 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.34■□□□□ 0.69
NEDD4P46934 RBPMS2P1-201ENST00000437762 623 ntBASIC19.34■□□□□ 0.69
NEDD4P46934 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.34■□□□□ 0.69
NEDD4P46934 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.34■□□□□ 0.69
NEDD4P46934 SPTSSB-204ENST00000617024 1292 ntBASIC19.34■□□□□ 0.69
NEDD4P46934 AC093028.1-201ENST00000622998 982 ntBASIC19.34■□□□□ 0.69
NEDD4P46934 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.34■□□□□ 0.69
NEDD4P46934 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NEDD4P46934 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEDD4P46934 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEDD4P46934 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NEDD4P46934 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
NEDD4P46934 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
NEDD4P46934 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NEDD4P46934 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEDD4P46934 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NEDD4P46934 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEDD4P46934 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.33■□□□□ 0.69
NEDD4P46934 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms