Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 HMGA1P7-201ENST00000406908 502 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 PMS2P4-201ENST00000412466 1052 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 AC005034.1-201ENST00000426657 489 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 RN7SL589P-201ENST00000481268 310 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.66□□□□□ -0.06
HOXC12P31275 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 FAM86C2P-203ENST00000528684 1004 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.66□□□□□ -0.06
HOXC12P31275 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.66□□□□□ -0.06
HOXC12P31275 MIR3909-201ENST00000579518 119 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 AL035252.4-201ENST00000624174 288 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 AL391005.1-201ENST00000623953 2435 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 AP001094.4-201ENST00000579008 2176 ntBASIC14.66□□□□□ -0.06
HOXC12P31275 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 RNU1-129P-201ENST00000384064 167 ntBASIC14.65□□□□□ -0.06
HOXC12P31275 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.65□□□□□ -0.06
HOXC12P31275 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.65□□□□□ -0.06
HOXC12P31275 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.65□□□□□ -0.06
HOXC12P31275 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 U1.21-201ENST00000580816 167 ntBASIC14.65□□□□□ -0.06
HOXC12P31275 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HOXC12P31275 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.65□□□□□ -0.06
HOXC12P31275 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 AC092919.2-201ENST00000623631 1645 ntBASIC14.65□□□□□ -0.06
HOXC12P31275 AC006277.1-201ENST00000624348 1610 ntBASIC14.65□□□□□ -0.06
HOXC12P31275 LINC00895-201ENST00000629028 1637 ntBASIC14.65□□□□□ -0.06
HOXC12P31275 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXC12P31275 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HOXC12P31275 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
HOXC12P31275 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HOXC12P31275 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
HOXC12P31275 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HOXC12P31275 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HOXC12P31275 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.64□□□□□ -0.07
HOXC12P31275 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXC12P31275 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms