Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN6P29350 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.69■□□□□ 0.1
PTPN6P29350 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN6P29350 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PTPN6P29350 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTPN6P29350 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PTPN6P29350 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN6P29350 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN6P29350 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTPN6P29350 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PTPN6P29350 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN6P29350 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN6P29350 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN6P29350 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN6P29350 AL671883.3-201ENST00000603274 991 ntBASIC15.68■□□□□ 0.1
PTPN6P29350 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.68■□□□□ 0.1
PTPN6P29350 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTPN6P29350 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN6P29350 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN6P29350 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN6P29350 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.67■□□□□ 0.1
PTPN6P29350 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 LINC00554-201ENST00000564841 3011 ntBASIC15.67■□□□□ 0.1
PTPN6P29350 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 MIR574-201ENST00000385209 96 ntBASIC15.67■□□□□ 0.1
PTPN6P29350 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PTPN6P29350 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PTPN6P29350 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PTPN6P29350 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.67■□□□□ 0.1
PTPN6P29350 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 AC108751.1-201ENST00000490852 363 ntBASIC15.67■□□□□ 0.1
PTPN6P29350 IGHV3-65-201ENST00000523210 341 ntBASIC15.67■□□□□ 0.1
PTPN6P29350 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN6P29350 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN6P29350 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 AC008667.4-201ENST00000607370 168 ntBASIC15.67■□□□□ 0.1
PTPN6P29350 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.67■□□□□ 0.1
PTPN6P29350 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN6P29350 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN6P29350 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN6P29350 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN6P29350 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.66■□□□□ 0.1
PTPN6P29350 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 AC087641.1-201ENST00000557561 1021 ntBASIC15.66■□□□□ 0.1
PTPN6P29350 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms