Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.53□□□□□ -0.08
ATF1P18846 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ATF1P18846 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ATF1P18846 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ATF1P18846 CDC14C-201ENST00000428251 1719 ntBASIC14.53□□□□□ -0.08
ATF1P18846 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
ATF1P18846 AC099063.4-201ENST00000641099 1602 ntBASIC14.53□□□□□ -0.08
ATF1P18846 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.53□□□□□ -0.08
ATF1P18846 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.53□□□□□ -0.08
ATF1P18846 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.53□□□□□ -0.08
ATF1P18846 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.53□□□□□ -0.08
ATF1P18846 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.53□□□□□ -0.08
ATF1P18846 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ATF1P18846 AC093458.2-201ENST00000623150 629 ntBASIC14.53□□□□□ -0.08
ATF1P18846 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ATF1P18846 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.53□□□□□ -0.08
ATF1P18846 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ATF1P18846 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ATF1P18846 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 PPT1-215ENST00000641471 2368 ntBASIC14.53□□□□□ -0.08
ATF1P18846 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.53□□□□□ -0.08
ATF1P18846 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.53□□□□□ -0.08
ATF1P18846 LINC02447-202ENST00000501888 2146 ntBASIC14.53□□□□□ -0.08
ATF1P18846 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATF1P18846 NFIC-211ENST00000641145 8399 ntBASIC14.53□□□□□ -0.08
ATF1P18846 AC112504.1-201ENST00000623415 1841 ntBASIC14.52□□□□□ -0.08
ATF1P18846 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATF1P18846 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
ATF1P18846 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATF1P18846 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ATF1P18846 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
ATF1P18846 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ATF1P18846 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATF1P18846 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
ATF1P18846 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.52□□□□□ -0.08
ATF1P18846 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.52□□□□□ -0.08
ATF1P18846 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATF1P18846 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATF1P18846 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
ATF1P18846 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATF1P18846 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.52□□□□□ -0.09
ATF1P18846 RBM17P3-201ENST00000417687 1192 ntBASIC14.52□□□□□ -0.09
ATF1P18846 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.52□□□□□ -0.09
ATF1P18846 FOSL1P1-201ENST00000511041 816 ntBASIC14.52□□□□□ -0.09
ATF1P18846 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ATF1P18846 AL139424.1-201ENST00000607572 797 ntBASIC14.52□□□□□ -0.09
ATF1P18846 AL139288.1-201ENST00000623748 933 ntBASIC14.52□□□□□ -0.09
ATF1P18846 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.52□□□□□ -0.09
ATF1P18846 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.52□□□□□ -0.09
ATF1P18846 REXO1L8P-201ENST00000604378 1897 ntBASIC14.52□□□□□ -0.09
ATF1P18846 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.52□□□□□ -0.09
ATF1P18846 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.52□□□□□ -0.09
ATF1P18846 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.52□□□□□ -0.09
ATF1P18846 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 AL512652.2-201ENST00000625156 1716 ntBASIC14.52□□□□□ -0.09
ATF1P18846 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ATF1P18846 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.52□□□□□ -0.09
ATF1P18846 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.52□□□□□ -0.09
ATF1P18846 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATF1P18846 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.51□□□□□ -0.09
ATF1P18846 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ATF1P18846 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.51□□□□□ -0.09
ATF1P18846 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ATF1P18846 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATF1P18846 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATF1P18846 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ATF1P18846 AL031731.1-201ENST00000642131 2094 ntBASIC14.51□□□□□ -0.09
ATF1P18846 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.51□□□□□ -0.09
ATF1P18846 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.51□□□□□ -0.09
ATF1P18846 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATF1P18846 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ATF1P18846 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ATF1P18846 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms