Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC130P13994 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC130P13994 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC130P13994 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC130P13994 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.46■□□□□ 0.38
CCDC130P13994 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CCDC130P13994 KRT18P28-201ENST00000453838 1332 ntBASIC17.46■□□□□ 0.38
CCDC130P13994 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.46■□□□□ 0.38
CCDC130P13994 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CCDC130P13994 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC130P13994 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC130P13994 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC130P13994 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC130P13994 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC130P13994 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC130P13994 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC130P13994 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC130P13994 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC130P13994 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC130P13994 AC105233.2-201ENST00000523697 349 ntBASIC17.45■□□□□ 0.38
CCDC130P13994 AF228730.5-201ENST00000530288 346 ntBASIC17.45■□□□□ 0.38
CCDC130P13994 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 AC073389.1-201ENST00000595595 795 ntBASIC17.45■□□□□ 0.38
CCDC130P13994 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC130P13994 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC130P13994 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC130P13994 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC130P13994 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC130P13994 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC130P13994 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC130P13994 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC130P13994 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC130P13994 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 MIR346-201ENST00000362234 95 ntBASIC17.44■□□□□ 0.38
CCDC130P13994 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC130P13994 GPS2P2-201ENST00000430745 888 ntBASIC17.44■□□□□ 0.38
CCDC130P13994 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC130P13994 AC093724.1-201ENST00000448659 1027 ntBASIC17.44■□□□□ 0.38
CCDC130P13994 AC109322.1-201ENST00000524499 1264 ntBASIC17.44■□□□□ 0.38
CCDC130P13994 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC130P13994 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC130P13994 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC130P13994 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC130P13994 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC130P13994 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC130P13994 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC130P13994 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
CCDC130P13994 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC130P13994 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC130P13994 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC130P13994 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC130P13994 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC130P13994 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC130P13994 AC093028.1-201ENST00000622998 982 ntBASIC17.43■□□□□ 0.38
CCDC130P13994 AC084121.4-201ENST00000641598 221 ntBASIC17.43■□□□□ 0.38
CCDC130P13994 AF228730.8-201ENST00000642140 221 ntBASIC17.43■□□□□ 0.38
CCDC130P13994 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms