Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AF228730.5-201ENST00000530288 346 ntBASIC16.56■□□□□ 0.24
MMP2P08253 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP2P08253 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP2P08253 AC055717.3-201ENST00000622967 595 ntBASIC16.56■□□□□ 0.24
MMP2P08253 AL513210.1-201ENST00000629608 234 ntBASIC16.56■□□□□ 0.24
MMP2P08253 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.55■□□□□ 0.24
MMP2P08253 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP2P08253 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MMP2P08253 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.55■□□□□ 0.24
MMP2P08253 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP2P08253 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP2P08253 AC069335.1-201ENST00000489972 472 ntBASIC16.55■□□□□ 0.24
MMP2P08253 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP2P08253 AP000842.3-202ENST00000569238 1080 ntBASIC16.55■□□□□ 0.24
MMP2P08253 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MMP2P08253 AC023511.2-201ENST00000618803 211 ntBASIC16.55■□□□□ 0.24
MMP2P08253 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MMP2P08253 AC084121.4-201ENST00000641598 221 ntBASIC16.55■□□□□ 0.24
MMP2P08253 AF228730.8-201ENST00000642140 221 ntBASIC16.55■□□□□ 0.24
MMP2P08253 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
MMP2P08253 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP2P08253 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP2P08253 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP2P08253 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 AC004461.1-201ENST00000412461 403 ntBASIC16.54■□□□□ 0.24
MMP2P08253 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP2P08253 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP2P08253 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP2P08253 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.54■□□□□ 0.24
MMP2P08253 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.54■□□□□ 0.24
MMP2P08253 AC093520.2-201ENST00000561830 333 ntBASIC16.54■□□□□ 0.24
MMP2P08253 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.54■□□□□ 0.24
MMP2P08253 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP2P08253 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP2P08253 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MMP2P08253 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MMP2P08253 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.54■□□□□ 0.24
MMP2P08253 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MMP2P08253 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MMP2P08253 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms