Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA1P02708 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA1P02708 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CHRNA1P02708 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA1P02708 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
CHRNA1P02708 ARSEP1-201ENST00000420443 635 ntBASIC17.79■□□□□ 0.44
CHRNA1P02708 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA1P02708 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA1P02708 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.79■□□□□ 0.44
CHRNA1P02708 AC132938.2-201ENST00000579188 680 ntBASIC17.79■□□□□ 0.44
CHRNA1P02708 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CHRNA1P02708 AL591163.1-201ENST00000641757 987 ntBASIC17.79■□□□□ 0.44
CHRNA1P02708 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA1P02708 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA1P02708 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNA1P02708 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHRNA1P02708 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNA1P02708 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA1P02708 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA1P02708 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 AC105020.1-201ENST00000435356 2205 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.78■□□□□ 0.44
CHRNA1P02708 AP006294.1-201ENST00000415407 339 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.78■□□□□ 0.44
CHRNA1P02708 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.78■□□□□ 0.44
CHRNA1P02708 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.78■□□□□ 0.44
CHRNA1P02708 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 GIMAP3P-201ENST00000495150 836 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA1P02708 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 AC023310.3-201ENST00000557027 670 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.78■□□□□ 0.44
CHRNA1P02708 AC100756.1-201ENST00000562736 682 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 AC138749.3-201ENST00000567691 622 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA1P02708 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 AC116165.1-201ENST00000611806 668 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 MIR6069-201ENST00000620069 79 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 AP001094.4-201ENST00000579008 2176 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRNA1P02708 HTR7P1-202ENST00000624664 4411 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNA1P02708 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNA1P02708 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRNA1P02708 U82695.1-201ENST00000635752 1889 ntBASIC17.78■□□□□ 0.44
CHRNA1P02708 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHRNA1P02708 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHRNA1P02708 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNA1P02708 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
CHRNA1P02708 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNA1P02708 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNA1P02708 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 RN7SL752P-201ENST00000463779 287 ntBASIC17.77■□□□□ 0.44
CHRNA1P02708 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.77■□□□□ 0.44
CHRNA1P02708 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.77■□□□□ 0.44
CHRNA1P02708 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.77■□□□□ 0.44
CHRNA1P02708 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.77■□□□□ 0.44
CHRNA1P02708 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 AC007431.3-201ENST00000623221 587 ntBASIC17.77■□□□□ 0.44
CHRNA1P02708 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms