Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH16O75309 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH16O75309 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH16O75309 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH16O75309 AC016027.1-202ENST00000607927 1699 ntBASIC16.72■□□□□ 0.27
CDH16O75309 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH16O75309 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 NCF1C-201ENST00000438382 1427 ntBASIC16.71■□□□□ 0.27
CDH16O75309 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH16O75309 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 POM121L3P-201ENST00000419331 1163 ntBASIC16.71■□□□□ 0.27
CDH16O75309 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH16O75309 PAWRP1-201ENST00000451083 565 ntBASIC16.71■□□□□ 0.27
CDH16O75309 PRYP5-201ENST00000451909 266 ntBASIC16.71■□□□□ 0.27
CDH16O75309 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH16O75309 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH16O75309 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH16O75309 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDH16O75309 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH16O75309 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDH16O75309 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH16O75309 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CDH16O75309 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH16O75309 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH16O75309 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH16O75309 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDH16O75309 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDH16O75309 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDH16O75309 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.26
CDH16O75309 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDH16O75309 KRT18P1-202ENST00000452408 1331 ntBASIC16.7■□□□□ 0.26
CDH16O75309 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH16O75309 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH16O75309 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 IGHV3-47-201ENST00000425060 335 ntBASIC16.7■□□□□ 0.26
CDH16O75309 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.7■□□□□ 0.26
CDH16O75309 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 AC069148.1-201ENST00000608741 768 ntBASIC16.7■□□□□ 0.26
CDH16O75309 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 TNRC18P2-201ENST00000417666 2714 ntBASIC16.7■□□□□ 0.26
CDH16O75309 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH16O75309 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDH16O75309 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH16O75309 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CDH16O75309 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH16O75309 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH16O75309 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH16O75309 NORAD-201ENST00000565493 5339 ntBASIC16.69■□□□□ 0.26
CDH16O75309 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms