Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 MIR4525-201ENST00000580000 75 ntBASIC21.69■■□□□ 1.06
PIK3C2AO00443 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 REXO1L6P-201ENST00000603433 1515 ntBASIC21.69■■□□□ 1.06
PIK3C2AO00443 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC009053.2-201ENST00000563701 2365 ntBASIC21.69■■□□□ 1.06
PIK3C2AO00443 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 POU5F1P6-201ENST00000466990 990 ntBASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC104989.1-201ENST00000519711 778 ntBASIC21.69■■□□□ 1.06
PIK3C2AO00443 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.69■■□□□ 1.06
PIK3C2AO00443 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PIK3C2AO00443 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 AC004987.2-201ENST00000395959 1148 ntBASIC21.68■■□□□ 1.06
PIK3C2AO00443 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 AL049840.4-201ENST00000602422 811 ntBASIC21.68■■□□□ 1.06
PIK3C2AO00443 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 AC133552.6-201ENST00000613406 534 ntBASIC21.68■■□□□ 1.06
PIK3C2AO00443 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.68■■□□□ 1.06
PIK3C2AO00443 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PIK3C2AO00443 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.68■■□□□ 1.06
PIK3C2AO00443 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 BNIP3P1-202ENST00000550043 1585 ntBASIC21.67■■□□□ 1.06
PIK3C2AO00443 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 AC243562.2-201ENST00000561247 970 ntBASIC21.67■■□□□ 1.06
PIK3C2AO00443 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 GNRHR2-203ENST00000581100 1187 ntBASIC21.67■■□□□ 1.06
PIK3C2AO00443 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PIK3C2AO00443 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PIK3C2AO00443 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PIK3C2AO00443 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.66■■□□□ 1.06
PIK3C2AO00443 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PIK3C2AO00443 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.66■■□□□ 1.06
PIK3C2AO00443 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PIK3C2AO00443 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.66■■□□□ 1.06
PIK3C2AO00443 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.66■■□□□ 1.06
PIK3C2AO00443 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.66■■□□□ 1.06
PIK3C2AO00443 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.66■■□□□ 1.06
PIK3C2AO00443 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms