Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 MTHFR-217ENST00000641820 1569 ntBASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 AL021920.2-201ENST00000624828 1351 ntBASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF103-CHMP3A0A140T963 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 NCF1C-201ENST00000438382 1427 ntBASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC006538.1-201ENST00000567905 1585 ntBASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 AL353135.1-201ENST00000606729 504 ntBASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 AL022326.1-202ENST00000641533 845 ntBASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF103-CHMP3A0A140T963 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 AL136379.1-201ENST00000623471 2642 ntBASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 RBM17P3-201ENST00000417687 1192 ntBASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms