Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 MIR8072-201ENST00000614241 80 ntBASIC20.84■□□□□ 0.93
SCN11AQ9UI33 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 AL162274.1-201ENST00000617191 1098 ntBASIC20.84■□□□□ 0.93
SCN11AQ9UI33 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SCN11AQ9UI33 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 ANKRD19P-201ENST00000338192 862 ntBASIC20.83■□□□□ 0.93
SCN11AQ9UI33 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 TOMM22P5-201ENST00000416399 439 ntBASIC20.83■□□□□ 0.93
SCN11AQ9UI33 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 KRT17P8-201ENST00000540749 863 ntBASIC20.83■□□□□ 0.93
SCN11AQ9UI33 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 MIR6805-201ENST00000615055 62 ntBASIC20.83■□□□□ 0.93
SCN11AQ9UI33 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN11AQ9UI33 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN11AQ9UI33 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN11AQ9UI33 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN11AQ9UI33 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AC004987.2-201ENST00000395959 1148 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AC074338.1-201ENST00000416825 156 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 MEP1AP4-201ENST00000423244 1087 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 KRT18P64-201ENST00000434946 1219 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 RN7SL752P-201ENST00000463779 287 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AC243562.2-201ENST00000561247 970 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 BNIP3P1-202ENST00000550043 1585 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN11AQ9UI33 AC036164.1-201ENST00000570544 333 ntBASIC20.82■□□□□ 0.92
SCN11AQ9UI33 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms