Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TREX1Q9NSU2 AC010491.1-201ENST00000563101 2797 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AC008741.2-201ENST00000612792 3115 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AC008894.3-201ENST00000624324 3103 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AL591424.1-201ENST00000442569 1213 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AC074386.1-202ENST00000463561 864 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AP002472.1-201ENST00000577490 586 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AC140113.2-201ENST00000604370 208 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AC027601.4-201ENST00000611259 610 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 AC092865.6-201ENST00000642101 219 ntBASIC16.43■□□□□ 0.22
TREX1Q9NSU2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREX1Q9NSU2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 AC073439.1-201ENST00000624121 1774 ntBASIC16.42■□□□□ 0.22
TREX1Q9NSU2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 MIR648-201ENST00000385046 94 ntBASIC16.42■□□□□ 0.22
TREX1Q9NSU2 AC026396.1-201ENST00000419388 421 ntBASIC16.42■□□□□ 0.22
TREX1Q9NSU2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 FAM197Y3-203ENST00000618346 717 ntBASIC16.42■□□□□ 0.22
TREX1Q9NSU2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 CDC14C-201ENST00000428251 1719 ntBASIC16.42■□□□□ 0.22
TREX1Q9NSU2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREX1Q9NSU2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 AC112504.1-201ENST00000623415 1841 ntBASIC16.41■□□□□ 0.22
TREX1Q9NSU2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREX1Q9NSU2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms