Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 WASH6P-202ENST00000359512 1437 ntBASIC13.84□□□□□ -0.19
CCL13Q99616 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 MKNK2P1-201ENST00000437526 628 ntBASIC13.84□□□□□ -0.19
CCL13Q99616 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.84□□□□□ -0.19
CCL13Q99616 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.84□□□□□ -0.19
CCL13Q99616 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 MIR4469-201ENST00000583919 79 ntBASIC13.84□□□□□ -0.19
CCL13Q99616 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCL13Q99616 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 AC005052.1-201ENST00000625181 2492 ntBASIC13.84□□□□□ -0.19
CCL13Q99616 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
CCL13Q99616 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL13Q99616 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCL13Q99616 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCL13Q99616 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL13Q99616 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
CCL13Q99616 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL13Q99616 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL13Q99616 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCL13Q99616 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 PCGF3-213ENST00000620529 1899 ntBASIC13.83□□□□□ -0.2
CCL13Q99616 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL13Q99616 AL355306.1-201ENST00000415580 579 ntBASIC13.83□□□□□ -0.2
CCL13Q99616 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 KRT18P34-201ENST00000488218 1270 ntBASIC13.83□□□□□ -0.2
CCL13Q99616 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL13Q99616 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 RARRES2P8-201ENST00000566335 367 ntBASIC13.83□□□□□ -0.2
CCL13Q99616 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL13Q99616 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL13Q99616 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 AC020765.3-201ENST00000613051 740 ntBASIC13.83□□□□□ -0.2
CCL13Q99616 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 AC023511.2-201ENST00000618803 211 ntBASIC13.83□□□□□ -0.2
CCL13Q99616 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.83□□□□□ -0.2
CCL13Q99616 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCL13Q99616 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL13Q99616 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL13Q99616 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL13Q99616 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL13Q99616 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms