Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.75■□□□□ 0.27
NOTCH4Q99466 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 CDC14C-201ENST00000428251 1719 ntBASIC16.75■□□□□ 0.27
NOTCH4Q99466 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 TARDBPP1-201ENST00000442013 1203 ntBASIC16.75■□□□□ 0.27
NOTCH4Q99466 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 AL158212.4-201ENST00000624062 1286 ntBASIC16.75■□□□□ 0.27
NOTCH4Q99466 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH4Q99466 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.75■□□□□ 0.27
NOTCH4Q99466 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 AC009053.2-201ENST00000563701 2365 ntBASIC16.74■□□□□ 0.27
NOTCH4Q99466 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.74■□□□□ 0.27
NOTCH4Q99466 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.74■□□□□ 0.27
NOTCH4Q99466 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH4Q99466 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 AC005332.8-201ENST00000622750 2735 ntBASIC16.73■□□□□ 0.27
NOTCH4Q99466 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 AC022494.1-201ENST00000466044 728 ntBASIC16.73■□□□□ 0.27
NOTCH4Q99466 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 AP005482.1-201ENST00000563722 1273 ntBASIC16.73■□□□□ 0.27
NOTCH4Q99466 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 MIR6775-201ENST00000617557 69 ntBASIC16.73■□□□□ 0.27
NOTCH4Q99466 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH4Q99466 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH4Q99466 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH4Q99466 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH4Q99466 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH4Q99466 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH4Q99466 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NOTCH4Q99466 FO393414.2-201ENST00000405153 598 ntBASIC16.72■□□□□ 0.27
NOTCH4Q99466 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH4Q99466 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms