Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 ACTG1P14-201ENST00000446382 1122 ntBASIC14.51□□□□□ -0.09
TMEM54Q969K7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 AL135744.1-201ENST00000565098 629 ntBASIC14.51□□□□□ -0.09
TMEM54Q969K7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TMEM54Q969K7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM54Q969K7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 AC079328.2-201ENST00000561241 3354 ntBASIC14.5□□□□□ -0.09
TMEM54Q969K7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 AL138918.1-201ENST00000568306 659 ntBASIC14.5□□□□□ -0.09
TMEM54Q969K7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 AC073389.1-201ENST00000595595 795 ntBASIC14.5□□□□□ -0.09
TMEM54Q969K7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM54Q969K7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM54Q969K7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms