Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 SPDYE11-202ENST00000450699 704 ntBASIC17.47■□□□□ 0.39
UBA3Q8TBC4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AC243562.1-201ENST00000560672 389 ntBASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 SPDYE9P-201ENST00000570642 692 ntBASIC17.47■□□□□ 0.39
UBA3Q8TBC4 SPDYE10P-202ENST00000612005 668 ntBASIC17.47■□□□□ 0.39
UBA3Q8TBC4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 SPDYE8P-202ENST00000612377 668 ntBASIC17.47■□□□□ 0.39
UBA3Q8TBC4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 AC211486.1-202ENST00000416371 468 ntBASIC17.46■□□□□ 0.39
UBA3Q8TBC4 AC211476.1-201ENST00000503899 468 ntBASIC17.46■□□□□ 0.39
UBA3Q8TBC4 FAM86C2P-203ENST00000528684 1004 ntBASIC17.46■□□□□ 0.39
UBA3Q8TBC4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 AC005622.1-201ENST00000636801 1703 ntBASIC17.46■□□□□ 0.39
UBA3Q8TBC4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBA3Q8TBC4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UBA3Q8TBC4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBA3Q8TBC4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBA3Q8TBC4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UBA3Q8TBC4 AKAP8P1-201ENST00000434743 1349 ntBASIC17.46■□□□□ 0.38
UBA3Q8TBC4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UBA3Q8TBC4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms