Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 AC092919.2-201ENST00000623631 1645 ntBASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 RNU1-129P-201ENST00000384064 167 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 AC211486.1-202ENST00000416371 468 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 MKNK2P1-201ENST00000437526 628 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 AC211476.1-201ENST00000503899 468 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 U1.21-201ENST00000580816 167 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 MIR4469-201ENST00000583919 79 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 AC091812.2-201ENST00000619081 385 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 AC006449.6-201ENST00000612330 2296 ntBASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SMARCC2Q8TAQ2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 AL365203.3-201ENST00000609742 2057 ntBASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 RPS8P6-201ENST00000426177 609 ntBASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 AC020765.3-201ENST00000613051 740 ntBASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCC2Q8TAQ2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 AC004967.1-201ENST00000453589 447 ntBASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 AP002472.1-201ENST00000577490 586 ntBASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 MIR3909-201ENST00000579518 119 ntBASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 AC134684.3-201ENST00000641758 218 ntBASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms