Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AC004967.1-201ENST00000453589 447 ntBASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AC105233.2-201ENST00000523697 349 ntBASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AF228730.5-201ENST00000530288 346 ntBASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AP000842.3-202ENST00000569238 1080 ntBASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
ZIC4Q8N9L1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AL589702.1-201ENST00000641229 1509 ntBASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 MIR1233-2-201ENST00000408138 82 ntBASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 MIR1233-1-201ENST00000408722 82 ntBASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AC142381.1-201ENST00000426099 345 ntBASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
ZIC4Q8N9L1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms