Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 AC005229.1-201ENST00000392885 409 ntBASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 AC244669.2-201ENST00000612320 853 ntBASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AC007613.1-201ENST00000572811 2597 ntBASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AL691432.1-201ENST00000596308 1422 ntBASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 BOLA2P3-201ENST00000404566 256 ntBASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL27A1Q8IZC6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AC108725.1-201ENST00000495472 409 ntBASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AL583810.1-201ENST00000553344 1045 ntBASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 CU634019.7-201ENST00000624153 1185 ntBASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 FP236241.2-201ENST00000624906 1185 ntBASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AC099548.2-209ENST00000480264 625 ntBASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL27A1Q8IZC6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms