Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 HIST2H2BC-201ENST00000498492 580 ntBASIC13.67□□□□□ -0.22
CSMD2Q7Z408 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 AC097724.1-201ENST00000609581 426 ntBASIC13.67□□□□□ -0.22
CSMD2Q7Z408 NEFHP1-201ENST00000412845 2629 ntBASIC13.67□□□□□ -0.22
CSMD2Q7Z408 AC012313.1-201ENST00000593393 3059 ntBASIC13.67□□□□□ -0.22
CSMD2Q7Z408 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.67□□□□□ -0.22
CSMD2Q7Z408 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 AC067852.2-201ENST00000590513 2313 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 SLC25A1P3-201ENST00000395415 828 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 IMP3P2-201ENST00000489760 475 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 AC036164.1-201ENST00000570544 333 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 AL133373.2-201ENST00000623187 2828 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 AC090164.3-201ENST00000610780 2143 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 AC005702.4-201ENST00000618393 416 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 ACTG1P3-201ENST00000431775 1114 ntBASIC13.66□□□□□ -0.22
CSMD2Q7Z408 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.66□□□□□ -0.22
CSMD2Q7Z408 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 Z93015.1-201ENST00000451718 390 ntBASIC13.65□□□□□ -0.22
CSMD2Q7Z408 AC018470.1-201ENST00000624790 3129 ntBASIC13.65□□□□□ -0.22
CSMD2Q7Z408 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 SNX33P1-201ENST00000592116 1762 ntBASIC13.65□□□□□ -0.22
CSMD2Q7Z408 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 Z97205.2-201ENST00000564697 1639 ntBASIC13.65□□□□□ -0.22
CSMD2Q7Z408 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.65□□□□□ -0.22
CSMD2Q7Z408 AC124283.3-201ENST00000570869 594 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms