Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 SLC25A6P2-201ENST00000497974 877 ntBASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 AC005412.3-201ENST00000580309 715 ntBASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 AC008667.4-201ENST00000607370 168 ntBASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AC006449.5-201ENST00000610658 2098 ntBASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 ALOX12P2-203ENST00000570921 1945 ntBASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 MIR4492-201ENST00000581627 80 ntBASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AL356488.2-201ENST00000602755 427 ntBASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 AL662844.4-201ENST00000606367 2838 ntBASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2AQ7L7L0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 AC073621.1-201ENST00000392730 636 ntBASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 KRT18P67-201ENST00000432816 1264 ntBASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 AC087641.1-201ENST00000557561 1021 ntBASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.11■□□□□ 0.01
HIST3H2AQ7L7L0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms