Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCP2Q5VXM1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 NOC2LP2-201ENST00000407594 1944 ntBASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 RRP7BP-205ENST00000566851 833 ntBASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 AL512652.2-201ENST00000625156 1716 ntBASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCP2Q5VXM1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCP2Q5VXM1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms