Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC134312.5-201ENST00000568031 1313 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 NKAIN1P1-201ENST00000435754 582 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 POM121L10P-201ENST00000436994 1285 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC134698.3-201ENST00000523880 214 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 RN7SL555P-201ENST00000584742 339 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 EEF1DP1-201ENST00000585891 896 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC016700.1-201ENST00000429424 312 ntBASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AL158212.4-201ENST00000624062 1286 ntBASIC14.09□□□□□ -0.15
LRRK2Q5S007 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC018735.1-201ENST00000437208 1502 ntBASIC14.09□□□□□ -0.15
LRRK2Q5S007 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC134915.1-201ENST00000426461 574 ntBASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC093433.1-201ENST00000458048 571 ntBASIC14.09□□□□□ -0.15
LRRK2Q5S007 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRK2Q5S007 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRK2Q5S007 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRRK2Q5S007 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRRK2Q5S007 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LRRK2Q5S007 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRRK2Q5S007 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRRK2Q5S007 RPL13P2-201ENST00000440687 659 ntBASIC14.08□□□□□ -0.15
LRRK2Q5S007 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.08□□□□□ -0.15
LRRK2Q5S007 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.08□□□□□ -0.15
LRRK2Q5S007 HLA-C-210ENST00000640219 976 ntBASIC14.08□□□□□ -0.15
LRRK2Q5S007 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms