Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDC42P60953 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC42P60953 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC42P60953 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC42P60953 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CDC42P60953 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC42P60953 AC011498.5-201ENST00000592027 486 ntBASIC15.17■□□□□ 0.02
CDC42P60953 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 LINC02447-202ENST00000501888 2146 ntBASIC15.17■□□□□ 0.02
CDC42P60953 AC004817.3-201ENST00000602957 2129 ntBASIC15.17■□□□□ 0.02
CDC42P60953 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.17■□□□□ 0.02
CDC42P60953 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 AC073508.3-201ENST00000619697 1419 ntBASIC15.17■□□□□ 0.02
CDC42P60953 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDC42P60953 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 SNX33P1-201ENST00000592116 1762 ntBASIC15.16■□□□□ 0.02
CDC42P60953 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 PCDHA3-202ENST00000532566 4594 ntBASIC15.16■□□□□ 0.02
CDC42P60953 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC42P60953 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 KRT8P26-201ENST00000534154 1276 ntBASIC15.16■□□□□ 0.02
CDC42P60953 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.16■□□□□ 0.02
CDC42P60953 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC42P60953 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.16■□□□□ 0.02
CDC42P60953 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.16■□□□□ 0.02
CDC42P60953 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 LINC01023-201ENST00000606054 436 ntBASIC15.16■□□□□ 0.02
CDC42P60953 AL590326.2-201ENST00000625139 305 ntBASIC15.16■□□□□ 0.02
CDC42P60953 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC42P60953 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC42P60953 CDC14C-201ENST00000428251 1719 ntBASIC15.16■□□□□ 0.02
CDC42P60953 LINC01144-201ENST00000626198 1710 ntBASIC15.16■□□□□ 0.02
CDC42P60953 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC42P60953 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 REXO1L8P-201ENST00000604378 1897 ntBASIC15.16■□□□□ 0.02
CDC42P60953 KRT8P39-201ENST00000396270 1433 ntBASIC15.16■□□□□ 0.02
CDC42P60953 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC42P60953 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC42P60953 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC42P60953 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 PRAL-201ENST00000624952 3286 ntBASIC15.15■□□□□ 0.02
CDC42P60953 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CDC42P60953 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC42P60953 AC099063.4-201ENST00000641099 1602 ntBASIC15.15■□□□□ 0.02
CDC42P60953 PCGF3-213ENST00000620529 1899 ntBASIC15.15■□□□□ 0.02
CDC42P60953 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms