Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC016734.2-201ENST00000624325 1377 ntBASIC14.27□□□□□ -0.12
ACTBP60709 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.27□□□□□ -0.12
ACTBP60709 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ACTBP60709 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.27□□□□□ -0.13
ACTBP60709 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.27□□□□□ -0.13
ACTBP60709 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.27□□□□□ -0.13
ACTBP60709 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.27□□□□□ -0.13
ACTBP60709 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.27□□□□□ -0.13
ACTBP60709 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 AL138831.2-201ENST00000606564 490 ntBASIC14.27□□□□□ -0.13
ACTBP60709 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.27□□□□□ -0.13
ACTBP60709 AL358472.4-201ENST00000633140 710 ntBASIC14.27□□□□□ -0.13
ACTBP60709 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ACTBP60709 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ACTBP60709 OR2I1P-209ENST00000641730 5365 ntBASIC14.27□□□□□ -0.13
ACTBP60709 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ACTBP60709 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
ACTBP60709 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 AC007326.2-201ENST00000624224 7579 ntBASIC14.27□□□□□ -0.13
ACTBP60709 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.27□□□□□ -0.13
ACTBP60709 AC073347.1-201ENST00000421633 2643 ntBASIC14.27□□□□□ -0.13
ACTBP60709 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ACTBP60709 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.26□□□□□ -0.13
ACTBP60709 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 AC097637.2-201ENST00000624096 1997 ntBASIC14.26□□□□□ -0.13
ACTBP60709 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 PCDHA3-202ENST00000532566 4594 ntBASIC14.26□□□□□ -0.13
ACTBP60709 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ACTBP60709 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.26□□□□□ -0.13
ACTBP60709 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 ACTG1P4-201ENST00000425123 1122 ntBASIC14.26□□□□□ -0.13
ACTBP60709 TSSC2-201ENST00000450217 709 ntBASIC14.26□□□□□ -0.13
ACTBP60709 VENTXP7-201ENST00000475503 772 ntBASIC14.26□□□□□ -0.13
ACTBP60709 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.26□□□□□ -0.13
ACTBP60709 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.26□□□□□ -0.13
ACTBP60709 AC091076.1-201ENST00000610741 619 ntBASIC14.26□□□□□ -0.13
ACTBP60709 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.26□□□□□ -0.13
ACTBP60709 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.26□□□□□ -0.13
ACTBP60709 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.26□□□□□ -0.13
ACTBP60709 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.26□□□□□ -0.13
ACTBP60709 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.26□□□□□ -0.13
ACTBP60709 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ACTBP60709 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ACTBP60709 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.25□□□□□ -0.13
ACTBP60709 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 KRT18P1-202ENST00000452408 1331 ntBASIC14.25□□□□□ -0.13
ACTBP60709 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.25□□□□□ -0.13
ACTBP60709 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.25□□□□□ -0.13
ACTBP60709 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.25□□□□□ -0.13
ACTBP60709 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms