Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SUMO3P55854 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.92□□□□□ -0.02
SUMO3P55854 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.92□□□□□ -0.02
SUMO3P55854 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.92□□□□□ -0.02
SUMO3P55854 TIMM8BP1-201ENST00000452384 211 ntBASIC14.92□□□□□ -0.02
SUMO3P55854 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.92□□□□□ -0.02
SUMO3P55854 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.92□□□□□ -0.02
SUMO3P55854 AC243562.1-201ENST00000560672 389 ntBASIC14.92□□□□□ -0.02
SUMO3P55854 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 MIR4469-201ENST00000583919 79 ntBASIC14.92□□□□□ -0.02
SUMO3P55854 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 AC027307.2-201ENST00000591252 911 ntBASIC14.92□□□□□ -0.02
SUMO3P55854 AC010327.4-202ENST00000591484 748 ntBASIC14.92□□□□□ -0.02
SUMO3P55854 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.92□□□□□ -0.02
SUMO3P55854 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.92□□□□□ -0.02
SUMO3P55854 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
SUMO3P55854 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SUMO3P55854 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SUMO3P55854 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 AC006449.6-201ENST00000612330 2296 ntBASIC14.92□□□□□ -0.02
SUMO3P55854 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
SUMO3P55854 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
SUMO3P55854 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SUMO3P55854 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SUMO3P55854 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
SUMO3P55854 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.91□□□□□ -0.02
SUMO3P55854 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.91□□□□□ -0.02
SUMO3P55854 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.91□□□□□ -0.02
SUMO3P55854 AC006449.5-201ENST00000610658 2098 ntBASIC14.91□□□□□ -0.02
SUMO3P55854 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SUMO3P55854 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
SUMO3P55854 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.91□□□□□ -0.02
SUMO3P55854 AC098859.1-201ENST00000502915 1238 ntBASIC14.91□□□□□ -0.02
SUMO3P55854 AC079140.1-201ENST00000508039 487 ntBASIC14.91□□□□□ -0.02
SUMO3P55854 KRT8P48-201ENST00000515599 1220 ntBASIC14.91□□□□□ -0.02
SUMO3P55854 IGHV3-62-201ENST00000520057 340 ntBASIC14.91□□□□□ -0.02
SUMO3P55854 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 AC092865.5-201ENST00000545435 363 ntBASIC14.91□□□□□ -0.02
SUMO3P55854 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.91□□□□□ -0.02
SUMO3P55854 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.91□□□□□ -0.02
SUMO3P55854 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.91□□□□□ -0.02
SUMO3P55854 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.91□□□□□ -0.02
SUMO3P55854 REXO1L8P-201ENST00000604378 1897 ntBASIC14.91□□□□□ -0.02
SUMO3P55854 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SUMO3P55854 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SUMO3P55854 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 AC005052.1-201ENST00000625181 2492 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SUMO3P55854 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms