Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFERP55789 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
GFERP55789 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFERP55789 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFERP55789 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.72■□□□□ 0.11
GFERP55789 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
GFERP55789 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFERP55789 AL035456.1-201ENST00000456064 1369 ntBASIC15.72■□□□□ 0.11
GFERP55789 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFERP55789 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFERP55789 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
GFERP55789 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GFERP55789 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.71■□□□□ 0.11
GFERP55789 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 CETN4P-206ENST00000642099 2168 ntBASIC15.71■□□□□ 0.11
GFERP55789 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GFERP55789 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.71■□□□□ 0.11
GFERP55789 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.71■□□□□ 0.11
GFERP55789 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.71■□□□□ 0.11
GFERP55789 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.71■□□□□ 0.11
GFERP55789 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.71■□□□□ 0.11
GFERP55789 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 LINC02560-201ENST00000596379 459 ntBASIC15.71■□□□□ 0.11
GFERP55789 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.71■□□□□ 0.11
GFERP55789 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.71■□□□□ 0.11
GFERP55789 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.71■□□□□ 0.11
GFERP55789 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.71■□□□□ 0.11
GFERP55789 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFERP55789 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
GFERP55789 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFERP55789 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFERP55789 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
GFERP55789 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFERP55789 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
GFERP55789 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GFERP55789 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFERP55789 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GFERP55789 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
GFERP55789 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 GGT3P-204ENST00000453783 1664 ntBASIC15.7■□□□□ 0.1
GFERP55789 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.7■□□□□ 0.1
GFERP55789 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GFERP55789 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
GFERP55789 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GFERP55789 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.7■□□□□ 0.1
GFERP55789 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
GFERP55789 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GFERP55789 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.7■□□□□ 0.1
GFERP55789 RPL37AP1-201ENST00000412502 279 ntBASIC15.7■□□□□ 0.1
GFERP55789 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.7■□□□□ 0.1
GFERP55789 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.7■□□□□ 0.1
GFERP55789 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
GFERP55789 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.7■□□□□ 0.1
GFERP55789 TERF1P3-201ENST00000505638 1227 ntBASIC15.7■□□□□ 0.1
GFERP55789 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.7■□□□□ 0.1
GFERP55789 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.7■□□□□ 0.1
GFERP55789 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.7■□□□□ 0.1
GFERP55789 TEX28P1-201ENST00000613479 1221 ntBASIC15.7■□□□□ 0.1
GFERP55789 TEX28P2-201ENST00000617764 1221 ntBASIC15.7■□□□□ 0.1
GFERP55789 AC008761.3-201ENST00000624803 892 ntBASIC15.7■□□□□ 0.1
GFERP55789 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GFERP55789 AC022211.2-201ENST00000585075 2527 ntBASIC15.7■□□□□ 0.1
GFERP55789 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFERP55789 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GFERP55789 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms