Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AL354751.1-201ENST00000412768 1863 ntBASIC18.32■□□□□ 0.52
CENPFP49454 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPFP49454 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPFP49454 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CENPFP49454 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPFP49454 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPFP49454 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPFP49454 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPFP49454 AL158212.4-201ENST00000624062 1286 ntBASIC18.32■□□□□ 0.52
CENPFP49454 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPFP49454 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 LDHBP1-201ENST00000455730 1119 ntBASIC18.32■□□□□ 0.52
CENPFP49454 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPFP49454 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.32■□□□□ 0.52
CENPFP49454 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CENPFP49454 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CENPFP49454 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPFP49454 RN7SL399P-201ENST00000471648 279 ntBASIC18.31■□□□□ 0.52
CENPFP49454 AC079328.1-201ENST00000560358 952 ntBASIC18.31■□□□□ 0.52
CENPFP49454 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.31■□□□□ 0.52
CENPFP49454 AC010328.2-201ENST00000597698 1111 ntBASIC18.31■□□□□ 0.52
CENPFP49454 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPFP49454 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CENPFP49454 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CENPFP49454 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
CENPFP49454 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CENPFP49454 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.31■□□□□ 0.52
CENPFP49454 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.31■□□□□ 0.52
CENPFP49454 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPFP49454 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 AL031731.1-201ENST00000642131 2094 ntBASIC18.31■□□□□ 0.52
CENPFP49454 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CENPFP49454 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPFP49454 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPFP49454 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPFP49454 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPFP49454 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.3■□□□□ 0.52
CENPFP49454 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPFP49454 AC091271.1-201ENST00000611877 1162 ntBASIC18.3■□□□□ 0.52
CENPFP49454 AC138627.1-207ENST00000641560 1006 ntBASIC18.3■□□□□ 0.52
CENPFP49454 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.3■□□□□ 0.52
CENPFP49454 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.3■□□□□ 0.52
CENPFP49454 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.3■□□□□ 0.52
CENPFP49454 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 AC068587.3-201ENST00000526613 355 ntBASIC18.3■□□□□ 0.52
CENPFP49454 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPFP49454 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPFP49454 AC016629.1-201ENST00000596579 586 ntBASIC18.3■□□□□ 0.52
CENPFP49454 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CENPFP49454 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CENPFP49454 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CENPFP49454 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CENPFP49454 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPFP49454 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CENPFP49454 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPFP49454 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CENPFP49454 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.3■□□□□ 0.52
CENPFP49454 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.3■□□□□ 0.52
CENPFP49454 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.3■□□□□ 0.52
CENPFP49454 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPFP49454 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPFP49454 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPFP49454 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPFP49454 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms