Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GRIA4P48058 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA4P48058 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.92■□□□□ 0.3
GRIA4P48058 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA4P48058 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA4P48058 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA4P48058 AC006449.5-201ENST00000610658 2098 ntBASIC16.92■□□□□ 0.3
GRIA4P48058 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA4P48058 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA4P48058 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
GRIA4P48058 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 AC012569.1-201ENST00000591191 1524 ntBASIC16.91■□□□□ 0.3
GRIA4P48058 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GRIA4P48058 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.91■□□□□ 0.3
GRIA4P48058 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.91■□□□□ 0.3
GRIA4P48058 FAM86C2P-203ENST00000528684 1004 ntBASIC16.91■□□□□ 0.3
GRIA4P48058 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.91■□□□□ 0.3
GRIA4P48058 LINC00628-201ENST00000628516 1289 ntBASIC16.91■□□□□ 0.3
GRIA4P48058 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.91■□□□□ 0.3
GRIA4P48058 AL139011.1-202ENST00000642063 584 ntBASIC16.91■□□□□ 0.3
GRIA4P48058 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GRIA4P48058 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.91■□□□□ 0.3
GRIA4P48058 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA4P48058 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.91■□□□□ 0.3
GRIA4P48058 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA4P48058 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GRIA4P48058 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
GRIA4P48058 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 AL355306.1-201ENST00000415580 579 ntBASIC16.9■□□□□ 0.3
GRIA4P48058 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.9■□□□□ 0.3
GRIA4P48058 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.9■□□□□ 0.3
GRIA4P48058 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.9■□□□□ 0.3
GRIA4P48058 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
GRIA4P48058 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.9■□□□□ 0.3
GRIA4P48058 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
GRIA4P48058 CYP2A7P1-201ENST00000595391 815 ntBASIC16.9■□□□□ 0.3
GRIA4P48058 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.9■□□□□ 0.3
GRIA4P48058 AL096865.1-201ENST00000606796 927 ntBASIC16.9■□□□□ 0.3
GRIA4P48058 AC026120.1-201ENST00000611536 926 ntBASIC16.9■□□□□ 0.3
GRIA4P48058 AC009093.7-201ENST00000623853 1223 ntBASIC16.9■□□□□ 0.3
GRIA4P48058 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
GRIA4P48058 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GRIA4P48058 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA4P48058 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA4P48058 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GRIA4P48058 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GRIA4P48058 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.89■□□□□ 0.3
GRIA4P48058 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GRIA4P48058 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.89■□□□□ 0.3
GRIA4P48058 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA4P48058 AL662844.4-201ENST00000606367 2838 ntBASIC16.89■□□□□ 0.29
GRIA4P48058 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA4P48058 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA4P48058 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA4P48058 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA4P48058 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GRIA4P48058 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA4P48058 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA4P48058 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA4P48058 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms