Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC005052.1-201ENST00000625181 2492 ntBASIC17.65■□□□□ 0.42
SSR1P43307 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SSR1P43307 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SSR1P43307 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.65■□□□□ 0.42
SSR1P43307 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SSR1P43307 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.65■□□□□ 0.42
SSR1P43307 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.65■□□□□ 0.42
SSR1P43307 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.65■□□□□ 0.42
SSR1P43307 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.65■□□□□ 0.42
SSR1P43307 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.65■□□□□ 0.42
SSR1P43307 AC107918.4-202ENST00000641623 219 ntBASIC17.65■□□□□ 0.42
SSR1P43307 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SSR1P43307 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SSR1P43307 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.65■□□□□ 0.42
SSR1P43307 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSR1P43307 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.64■□□□□ 0.42
SSR1P43307 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSR1P43307 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.64■□□□□ 0.42
SSR1P43307 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.64■□□□□ 0.42
SSR1P43307 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSR1P43307 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.64■□□□□ 0.42
SSR1P43307 AL161772.1-201ENST00000610494 4412 ntBASIC17.64■□□□□ 0.41
SSR1P43307 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SSR1P43307 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.64■□□□□ 0.41
SSR1P43307 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.64■□□□□ 0.41
SSR1P43307 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SSR1P43307 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.64■□□□□ 0.41
SSR1P43307 EMBP1-201ENST00000458200 901 ntBASIC17.64■□□□□ 0.41
SSR1P43307 RNPS1P1-201ENST00000507437 918 ntBASIC17.64■□□□□ 0.41
SSR1P43307 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.64■□□□□ 0.41
SSR1P43307 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.64■□□□□ 0.41
SSR1P43307 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.64■□□□□ 0.41
SSR1P43307 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
SSR1P43307 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SSR1P43307 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.64■□□□□ 0.41
SSR1P43307 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SSR1P43307 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.64■□□□□ 0.41
SSR1P43307 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SSR1P43307 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 AC002310.6-201ENST00000624451 1377 ntBASIC17.64■□□□□ 0.41
SSR1P43307 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.64■□□□□ 0.41
SSR1P43307 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR1P43307 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR1P43307 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR1P43307 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR1P43307 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR1P43307 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SSR1P43307 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR1P43307 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SSR1P43307 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR1P43307 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SSR1P43307 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.63■□□□□ 0.41
SSR1P43307 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSR1P43307 RPS15P9-201ENST00000494093 319 ntBASIC17.63■□□□□ 0.41
SSR1P43307 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.63■□□□□ 0.41
SSR1P43307 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR1P43307 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR1P43307 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR1P43307 MIR1199-201ENST00000621445 119 ntBASIC17.63■□□□□ 0.41
SSR1P43307 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR1P43307 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR1P43307 AL805961.1-202ENST00000641562 540 ntBASIC17.63■□□□□ 0.41
SSR1P43307 AF228730.7-201ENST00000641842 219 ntBASIC17.63■□□□□ 0.41
SSR1P43307 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR1P43307 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms