Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC1P35251 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC1P35251 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC1P35251 AL031055.1-201ENST00000606362 631 ntBASIC17.43■□□□□ 0.38
RFC1P35251 AC007064.4-201ENST00000637740 555 ntBASIC17.43■□□□□ 0.38
RFC1P35251 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC1P35251 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC1P35251 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFC1P35251 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RFC1P35251 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC1P35251 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.43■□□□□ 0.38
RFC1P35251 BCAR1-209ENST00000546196 1340 ntBASIC17.43■□□□□ 0.38
RFC1P35251 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 CYP2T1P-202ENST00000641596 2535 ntBASIC17.43■□□□□ 0.38
RFC1P35251 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RFC1P35251 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RFC1P35251 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
RFC1P35251 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RFC1P35251 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.42■□□□□ 0.38
RFC1P35251 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.42■□□□□ 0.38
RFC1P35251 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.42■□□□□ 0.38
RFC1P35251 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.42■□□□□ 0.38
RFC1P35251 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.42■□□□□ 0.38
RFC1P35251 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.42■□□□□ 0.38
RFC1P35251 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.42■□□□□ 0.38
RFC1P35251 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RFC1P35251 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RFC1P35251 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RFC1P35251 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RFC1P35251 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC1P35251 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RFC1P35251 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.42■□□□□ 0.38
RFC1P35251 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC1P35251 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RFC1P35251 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.41■□□□□ 0.38
RFC1P35251 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RFC1P35251 PMS2P4-201ENST00000412466 1052 ntBASIC17.41■□□□□ 0.38
RFC1P35251 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RFC1P35251 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.41■□□□□ 0.38
RFC1P35251 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC1P35251 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.41■□□□□ 0.38
RFC1P35251 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 KRT19P2-202ENST00000557173 1012 ntBASIC17.41■□□□□ 0.38
RFC1P35251 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.41■□□□□ 0.38
RFC1P35251 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RFC1P35251 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.41■□□□□ 0.38
RFC1P35251 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.41■□□□□ 0.38
RFC1P35251 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC1P35251 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC1P35251 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC1P35251 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFC1P35251 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC1P35251 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms