Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.59■□□□□ 0.09
COL5A1P20908 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.59■□□□□ 0.09
COL5A1P20908 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.59■□□□□ 0.09
COL5A1P20908 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.59■□□□□ 0.09
COL5A1P20908 LINC01115-203ENST00000606068 577 ntBASIC15.59■□□□□ 0.09
COL5A1P20908 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.59■□□□□ 0.09
COL5A1P20908 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
COL5A1P20908 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL5A1P20908 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL5A1P20908 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL5A1P20908 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.58■□□□□ 0.09
COL5A1P20908 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL5A1P20908 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COL5A1P20908 REXO1L6P-201ENST00000603433 1515 ntBASIC15.58■□□□□ 0.09
COL5A1P20908 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL5A1P20908 AL603756.1-201ENST00000606511 2163 ntBASIC15.58■□□□□ 0.09
COL5A1P20908 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COL5A1P20908 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL5A1P20908 AC105020.1-201ENST00000435356 2205 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
COL5A1P20908 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.58■□□□□ 0.08
COL5A1P20908 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.58■□□□□ 0.08
COL5A1P20908 BNIP3P42-201ENST00000454982 569 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.58■□□□□ 0.08
COL5A1P20908 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.58■□□□□ 0.08
COL5A1P20908 AC092552.1-201ENST00000547243 906 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 AC036164.1-201ENST00000570544 333 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 MIR5189-201ENST00000577370 114 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.58■□□□□ 0.08
COL5A1P20908 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.58■□□□□ 0.08
COL5A1P20908 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.58■□□□□ 0.08
COL5A1P20908 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.58■□□□□ 0.08
COL5A1P20908 BRI3BPP1-201ENST00000594224 787 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 BNIP3P29-201ENST00000598302 571 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 AC233724.13-201ENST00000598383 410 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.58■□□□□ 0.08
COL5A1P20908 AC011447.5-201ENST00000616168 564 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.58■□□□□ 0.08
COL5A1P20908 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.58■□□□□ 0.08
COL5A1P20908 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.58■□□□□ 0.08
COL5A1P20908 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
COL5A1P20908 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
COL5A1P20908 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL5A1P20908 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.58■□□□□ 0.08
COL5A1P20908 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.58■□□□□ 0.08
COL5A1P20908 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
COL5A1P20908 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 AC004945.1-201ENST00000416738 983 ntBASIC15.57■□□□□ 0.08
COL5A1P20908 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.57■□□□□ 0.08
COL5A1P20908 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.57■□□□□ 0.08
COL5A1P20908 AC104596.2-201ENST00000512793 793 ntBASIC15.57■□□□□ 0.08
COL5A1P20908 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
COL5A1P20908 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.57■□□□□ 0.08
COL5A1P20908 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
COL5A1P20908 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL5A1P20908 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL5A1P20908 CROCCP4-201ENST00000457096 498 ntBASIC15.57■□□□□ 0.08
COL5A1P20908 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.57■□□□□ 0.08
COL5A1P20908 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.57■□□□□ 0.08
COL5A1P20908 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms