Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 AC078925.2-201ENST00000624013 1973 ntBASIC18.63■□□□□ 0.57
PTPRFP10586 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPRFP10586 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.62■□□□□ 0.57
PTPRFP10586 AC233724.13-201ENST00000598383 410 ntBASIC18.62■□□□□ 0.57
PTPRFP10586 AC133552.6-201ENST00000613406 534 ntBASIC18.62■□□□□ 0.57
PTPRFP10586 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTPRFP10586 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPRFP10586 AC005622.1-201ENST00000636801 1703 ntBASIC18.62■□□□□ 0.57
PTPRFP10586 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.62■□□□□ 0.57
PTPRFP10586 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPRFP10586 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PTPRFP10586 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PTPRFP10586 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPRFP10586 KRT8P37-201ENST00000451609 1420 ntBASIC18.62■□□□□ 0.57
PTPRFP10586 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPRFP10586 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPRFP10586 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTPRFP10586 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPRFP10586 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPRFP10586 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTPRFP10586 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPRFP10586 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPRFP10586 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTPRFP10586 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTPRFP10586 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPRFP10586 INTS4P2-202ENST00000614726 2019 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPRFP10586 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPRFP10586 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPRFP10586 FTH1P14-201ENST00000482930 551 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPRFP10586 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPRFP10586 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPRFP10586 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPRFP10586 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPRFP10586 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPRFP10586 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 PCDHB18P-201ENST00000524813 2368 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPRFP10586 CSF2RBP1-201ENST00000447905 391 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 AC068587.3-201ENST00000526613 355 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPRFP10586 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPRFP10586 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPRFP10586 MIR4538-201ENST00000581377 78 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPRFP10586 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPRFP10586 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPRFP10586 AL049840.4-201ENST00000602422 811 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 MIR6799-201ENST00000620297 69 ntBASIC18.61■□□□□ 0.57
PTPRFP10586 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPRFP10586 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPRFP10586 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPRFP10586 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPRFP10586 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPRFP10586 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPRFP10586 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPRFP10586 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPRFP10586 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPRFP10586 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPRFP10586 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTPRFP10586 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPRFP10586 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPRFP10586 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPRFP10586 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPRFP10586 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms