Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.71□□□□□ -0.05
CNOT4O95628 AC068418.2-201ENST00000577309 3703 ntBASIC14.71□□□□□ -0.05
CNOT4O95628 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.71□□□□□ -0.05
CNOT4O95628 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.71□□□□□ -0.05
CNOT4O95628 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.71□□□□□ -0.05
CNOT4O95628 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CNOT4O95628 AL513210.1-201ENST00000629608 234 ntBASIC14.71□□□□□ -0.05
CNOT4O95628 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 AP001094.4-201ENST00000579008 2176 ntBASIC14.71□□□□□ -0.05
CNOT4O95628 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CNOT4O95628 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CNOT4O95628 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CNOT4O95628 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.71□□□□□ -0.06
CNOT4O95628 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.71□□□□□ -0.06
CNOT4O95628 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CNOT4O95628 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CNOT4O95628 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CNOT4O95628 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.71□□□□□ -0.06
CNOT4O95628 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.71□□□□□ -0.06
CNOT4O95628 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CNOT4O95628 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CNOT4O95628 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 HLA-J-202ENST00000469281 1241 ntBASIC14.7□□□□□ -0.06
CNOT4O95628 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.7□□□□□ -0.06
CNOT4O95628 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CNOT4O95628 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
CNOT4O95628 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.7□□□□□ -0.06
CNOT4O95628 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.7□□□□□ -0.06
CNOT4O95628 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.7□□□□□ -0.06
CNOT4O95628 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 AC105339.1-204ENST00000636249 355 ntBASIC14.7□□□□□ -0.06
CNOT4O95628 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CNOT4O95628 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms