Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 ACTL9-202ENST00000612068 1252 ntBASIC16.18■□□□□ 0.18
SIX3O95343 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX3O95343 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.18■□□□□ 0.18
SIX3O95343 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.18■□□□□ 0.18
SIX3O95343 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX3O95343 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX3O95343 AC105917.1-201ENST00000506637 2539 ntBASIC16.18■□□□□ 0.18
SIX3O95343 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SIX3O95343 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX3O95343 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SIX3O95343 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX3O95343 AC012569.1-201ENST00000591191 1524 ntBASIC16.18■□□□□ 0.18
SIX3O95343 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SIX3O95343 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SIX3O95343 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX3O95343 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX3O95343 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX3O95343 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX3O95343 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX3O95343 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX3O95343 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SIX3O95343 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX3O95343 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 POU5F1P6-201ENST00000466990 990 ntBASIC16.17■□□□□ 0.18
SIX3O95343 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.17■□□□□ 0.18
SIX3O95343 PGM5P2-202ENST00000637225 1043 ntBASIC16.17■□□□□ 0.18
SIX3O95343 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX3O95343 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX3O95343 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SIX3O95343 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.17■□□□□ 0.18
SIX3O95343 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SIX3O95343 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.17■□□□□ 0.18
SIX3O95343 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SIX3O95343 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SIX3O95343 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SIX3O95343 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIX3O95343 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
SIX3O95343 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SIX3O95343 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.16■□□□□ 0.18
SIX3O95343 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIX3O95343 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.16■□□□□ 0.18
SIX3O95343 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.16■□□□□ 0.18
SIX3O95343 AC092910.1-201ENST00000482027 1129 ntBASIC16.16■□□□□ 0.18
SIX3O95343 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 RN7SL510P-201ENST00000581311 263 ntBASIC16.16■□□□□ 0.18
SIX3O95343 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SIX3O95343 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIX3O95343 AL031008.1-201ENST00000619963 541 ntBASIC16.16■□□□□ 0.18
SIX3O95343 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.16■□□□□ 0.18
SIX3O95343 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIX3O95343 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX3O95343 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX3O95343 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX3O95343 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX3O95343 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms