Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF4O60810 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF4O60810 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 RNA5SP416-201ENST00000516838 111 ntBASIC15.87■□□□□ 0.13
PRAMEF4O60810 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 AL603832.2-201ENST00000566195 2125 ntBASIC15.87■□□□□ 0.13
PRAMEF4O60810 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 AC068137.2-201ENST00000605408 478 ntBASIC15.87■□□□□ 0.13
PRAMEF4O60810 AL078644.1-201ENST00000609881 752 ntBASIC15.87■□□□□ 0.13
PRAMEF4O60810 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.87■□□□□ 0.13
PRAMEF4O60810 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRAMEF4O60810 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 AC010491.1-201ENST00000563101 2797 ntBASIC15.86■□□□□ 0.13
PRAMEF4O60810 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 AL022342.1-201ENST00000400363 863 ntBASIC15.86■□□□□ 0.13
PRAMEF4O60810 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEF4O60810 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PRAMEF4O60810 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 AL365203.3-201ENST00000609742 2057 ntBASIC15.85■□□□□ 0.13
PRAMEF4O60810 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 AL592424.1-201ENST00000563624 1536 ntBASIC15.85■□□□□ 0.13
PRAMEF4O60810 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 AC093724.1-201ENST00000448659 1027 ntBASIC15.85■□□□□ 0.13
PRAMEF4O60810 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 AC007950.2-201ENST00000615045 2347 ntBASIC15.85■□□□□ 0.13
PRAMEF4O60810 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PRAMEF4O60810 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEF4O60810 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms