Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SSSCA1O60232 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.54□□□□□ -0.24
SSSCA1O60232 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.54□□□□□ -0.24
SSSCA1O60232 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.54□□□□□ -0.24
SSSCA1O60232 AC112907.2-201ENST00000448639 330 ntBASIC13.54□□□□□ -0.24
SSSCA1O60232 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SSSCA1O60232 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.54□□□□□ -0.24
SSSCA1O60232 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.54□□□□□ -0.24
SSSCA1O60232 AD001527.2-201ENST00000622994 785 ntBASIC13.54□□□□□ -0.24
SSSCA1O60232 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 REXO1L8P-201ENST00000604378 1897 ntBASIC13.54□□□□□ -0.24
SSSCA1O60232 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 TNRC18P2-201ENST00000417666 2714 ntBASIC13.54□□□□□ -0.24
SSSCA1O60232 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.54□□□□□ -0.24
SSSCA1O60232 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.53□□□□□ -0.24
SSSCA1O60232 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 AC099063.4-201ENST00000641099 1602 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SSSCA1O60232 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 OR2I1P-209ENST00000641730 5365 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 AP002414.1-201ENST00000391405 1147 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.53□□□□□ -0.24
SSSCA1O60232 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.53□□□□□ -0.24
SSSCA1O60232 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 AL845331.1-201ENST00000424978 1190 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 KRT18P38-201ENST00000449496 1282 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 LINC02447-202ENST00000501888 2146 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 AC145285.6-201ENST00000604632 637 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 AL353801.3-201ENST00000609898 542 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 AP006294.2-201ENST00000641667 209 ntBASIC13.53□□□□□ -0.24
SSSCA1O60232 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSSCA1O60232 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSSCA1O60232 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SSSCA1O60232 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SSSCA1O60232 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SSSCA1O60232 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSSCA1O60232 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms