Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CHD1O14646 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC26.1■■□□□ 1.77
CHD1O14646 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC26.1■■□□□ 1.77
CHD1O14646 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC26.1■■□□□ 1.77
CHD1O14646 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC26.1■■□□□ 1.77
CHD1O14646 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC26.1■■□□□ 1.77
CHD1O14646 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.09■■□□□ 1.77
CHD1O14646 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHD1O14646 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD1O14646 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC26.09■■□□□ 1.77
CHD1O14646 AC069218.1-201ENST00000435269 762 ntBASIC26.09■■□□□ 1.77
CHD1O14646 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC26.09■■□□□ 1.77
CHD1O14646 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CHD1O14646 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC26.09■■□□□ 1.77
CHD1O14646 IQSEC3P1-201ENST00000538799 536 ntBASIC26.09■■□□□ 1.77
CHD1O14646 IFT20-206ENST00000578122 834 ntTSL 2 BASIC26.09■■□□□ 1.77
CHD1O14646 IFT20-208ENST00000578985 831 ntTSL 3 BASIC26.09■■□□□ 1.77
CHD1O14646 AC104982.3-201ENST00000581995 514 ntBASIC26.09■■□□□ 1.77
CHD1O14646 MIR4750-201ENST00000584564 56 ntBASIC26.09■■□□□ 1.77
CHD1O14646 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHD1O14646 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CHD1O14646 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD1O14646 AC093503.3-201ENST00000624917 2352 ntBASIC26.09■■□□□ 1.77
CHD1O14646 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CHD1O14646 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHD1O14646 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD1O14646 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD1O14646 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CHD1O14646 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
CHD1O14646 UFM1-202ENST00000379649 846 ntTSL 4 BASIC26.08■■□□□ 1.77
CHD1O14646 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHD1O14646 AC134698.3-201ENST00000523880 214 ntBASIC26.08■■□□□ 1.77
CHD1O14646 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC26.08■■□□□ 1.77
CHD1O14646 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHD1O14646 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CHD1O14646 AL139011.1-202ENST00000642063 584 ntBASIC26.08■■□□□ 1.77
CHD1O14646 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHD1O14646 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHD1O14646 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC26.08■■□□□ 1.77
CHD1O14646 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
CHD1O14646 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHD1O14646 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CHD1O14646 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHD1O14646 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC26.08■■□□□ 1.76
CHD1O14646 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 AC044849.1-201ENST00000519737 1188 ntBASIC26.08■■□□□ 1.76
CHD1O14646 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC26.08■■□□□ 1.76
CHD1O14646 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC26.08■■□□□ 1.76
CHD1O14646 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC26.08■■□□□ 1.76
CHD1O14646 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC26.08■■□□□ 1.76
CHD1O14646 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CHD1O14646 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CHD1O14646 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.07■■□□□ 1.76
CHD1O14646 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.07■■□□□ 1.76
CHD1O14646 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHD1O14646 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHD1O14646 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHD1O14646 AL512652.2-201ENST00000625156 1716 ntBASIC26.07■■□□□ 1.76
CHD1O14646 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CHD1O14646 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHD1O14646 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHD1O14646 AL627389.1-201ENST00000413508 1182 ntBASIC26.07■■□□□ 1.76
CHD1O14646 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC26.07■■□□□ 1.76
CHD1O14646 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHD1O14646 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHD1O14646 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHD1O14646 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHD1O14646 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CHD1O14646 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC26.06■■□□□ 1.76
CHD1O14646 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC26.06■■□□□ 1.76
CHD1O14646 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHD1O14646 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
CHD1O14646 MIR3907-201ENST00000579424 151 ntBASIC26.06■■□□□ 1.76
CHD1O14646 NKG7-204ENST00000595217 816 ntTSL 2 BASIC26.06■■□□□ 1.76
CHD1O14646 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CHD1O14646 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.06■■□□□ 1.76
CHD1O14646 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CHD1O14646 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHD1O14646 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHD1O14646 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CHD1O14646 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC26.06■■□□□ 1.76
CHD1O14646 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHD1O14646 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms