Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.73■■□□□ 1.07
PIK3C2AO00443 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PIK3C2AO00443 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.73■■□□□ 1.07
PIK3C2AO00443 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PIK3C2AO00443 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.73■■□□□ 1.07
PIK3C2AO00443 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.73■■□□□ 1.07
PIK3C2AO00443 FAM86MP-201ENST00000340703 885 ntBASIC21.72■■□□□ 1.07
PIK3C2AO00443 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 AC092658.1-201ENST00000505836 891 ntBASIC21.72■■□□□ 1.07
PIK3C2AO00443 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 AL033527.5-201ENST00000641382 801 ntBASIC21.72■■□□□ 1.07
PIK3C2AO00443 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 UBALD1-205ENST00000590891 2641 ntBASIC21.72■■□□□ 1.07
PIK3C2AO00443 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 HNRNPUP1-201ENST00000554987 333 ntBASIC21.72■■□□□ 1.07
PIK3C2AO00443 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PIK3C2AO00443 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.72■■□□□ 1.07
PIK3C2AO00443 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.71■■□□□ 1.07
PIK3C2AO00443 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 INTS4P2-202ENST00000614726 2019 ntBASIC21.71■■□□□ 1.07
PIK3C2AO00443 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 PDIA3P1-201ENST00000471856 1510 ntBASIC21.71■■□□□ 1.07
PIK3C2AO00443 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 AL691432.1-201ENST00000596308 1422 ntBASIC21.71■■□□□ 1.07
PIK3C2AO00443 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PIK3C2AO00443 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PIK3C2AO00443 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.7■■□□□ 1.07
PIK3C2AO00443 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PIK3C2AO00443 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 RN7SL399P-201ENST00000471648 279 ntBASIC21.7■■□□□ 1.06
PIK3C2AO00443 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.7■■□□□ 1.06
PIK3C2AO00443 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.7■■□□□ 1.06
PIK3C2AO00443 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.7■■□□□ 1.06
PIK3C2AO00443 AC233724.13-201ENST00000598383 410 ntBASIC21.7■■□□□ 1.06
PIK3C2AO00443 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.7■■□□□ 1.06
PIK3C2AO00443 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.7■■□□□ 1.06
PIK3C2AO00443 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
PIK3C2AO00443 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PIK3C2AO00443 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms